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truB protein (Dialister invisus) - STRING interaction network
"truB" - tRNA-uridine isomerase in Dialister invisus
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
truBtRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (283 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein (307 aa)
 
   
  0.975
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (119 aa)
   
   
  0.949
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (875 aa)
 
 
  0.944
GCWU000321_01007
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (265 aa)
 
 
  0.940
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (658 aa)
   
 
  0.929
GCWU000321_00978
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (246 aa)
 
 
  0.924
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (512 aa)
     
   
  0.894
GCWU000321_00421
DHHA1 domain protein (323 aa)
              0.883
ylqF
Ribosome biogenesis GTPase A ; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (285 aa)
   
 
  0.858
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (213 aa)
   
 
  0.832
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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