STRINGSTRING
rimP protein (Dialister invisus) - STRING interaction network
"rimP" - Ribosome maturation factor RimP in Dialister invisus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rimPRibosome maturation factor RimP ; Required for maturation of 30S ribosomal subunits (156 aa)    
Predicted Functional Partners:
nusA
Transcription termination/antitermination protein NusA ; Participates in both transcription termination and antitermination (377 aa)
   
        0.968
GCWU000321_00425
Uncharacterized protein (88 aa)
 
   
  0.914
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (875 aa)
   
   
  0.897
GCWU000321_00424
Ribosomal protein L7Ae (102 aa)
 
          0.890
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (119 aa)
   
 
  0.787
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (283 aa)
   
   
  0.766
GCWU000321_00421
DHHA1 domain protein (323 aa)
   
        0.744
ribF
Riboflavin biosynthesis protein (307 aa)
              0.734
rpsL
30S ribosomal protein S12 ; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (126 aa)
     
 
  0.712
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (454 aa)
   
 
  0.569
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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