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mrnC protein (Dialister invisus) - STRING interaction network
"mrnC" - Mini-RNase III in Dialister invisus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrnCMini-RNase III ; Involved in correct processing of both the 5’ and 3’ ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors (155 aa)    
Predicted Functional Partners:
GCWU000321_00761
RNA methyltransferase, TrmH family, group 3 (282 aa)
   
        0.918
GCWU000321_00760
Uncharacterized protein (178 aa)
 
     
  0.912
cysS
Cysteinyl-tRNA synthetase (488 aa)
   
        0.888
polC
DNA polymerase III PolC-type ; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (1227 aa)
 
          0.642
GCWU000321_01821
S4 domain protein (263 aa)
   
          0.640
GCWU000321_00764
Uncharacterized protein (39 aa)
              0.616
GCWU000321_00184
Hydrolase, HD family (190 aa)
   
          0.600
ispF
Bifunctional enzyme IspD/IspF ; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (392 aa)
   
        0.592
rplK
50S ribosomal protein L11 ; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (141 aa)
 
        0.592
GCWU000321_00452
Uncharacterized protein (88 aa)
   
          0.551
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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