STRINGSTRING
GCWU000321_00823 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00823" - Flavoprotein family protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00823Flavoprotein family protein (419 aa)    
Predicted Functional Partners:
GCWU000321_00824
Pseudouridine synthase (239 aa)
     
      0.925
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (658 aa)
 
          0.886
GCWU000321_00826
ScpA/B protein (236 aa)
              0.883
scpB
Segregation and condensation protein B ; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (177 aa)
              0.883
cmk
Cytidine monophosphate kinase (227 aa)
              0.883
GCWU000321_00821
1-acyl-sn-glycerol-3-phosphate acyltransferase (206 aa)
              0.883
GCWU000321_00827
Orn/Lys/Arg decarboxylase, major domain protein (619 aa)
   
        0.680
GCWU000321_00706
Pseudouridine synthase (277 aa)
     
      0.488
GCWU000321_00862
ABC transporter, ATP-binding protein (627 aa)
 
          0.484
rpsD
30S ribosomal protein S4 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (197 aa)
              0.485
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
Server load: low (8%) [HD]