STRINGSTRING
GCWU000321_00831 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00831" - Aminotransferase, class I/II in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00831Aminotransferase, class I/II (425 aa)    
Predicted Functional Partners:
GCWU000321_01594
Prephenate dehydratase (283 aa)
   
 
  0.986
GCWU000321_01440
Prephenate dehydrogenase (284 aa)
       
  0.985
GCWU000321_00066
Aspartokinase (409 aa)
   
 
  0.966
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1180 aa)
   
    0.878
GCWU000321_01267
2-oxoacid-acceptor oxidoreductase, alpha subunit (612 aa)
   
    0.878
GCWU000321_00044
Aminotransferase, class I/II (389 aa)
   
  0.863
dat
D-amino-acid transaminase (292 aa)
     
 
  0.846
GCWU000321_00033
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (417 aa)
   
  0.841
GCWU000321_00231
Aminotransferase, class I/II (357 aa)
     
 
  0.788
carB
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1067 aa)
   
  0.784
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
Server load: low (8%) [HD]