STRINGSTRING
GCWU000321_00867 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00867" - Uncharacterized protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00867Uncharacterized protein (398 aa)    
Predicted Functional Partners:
GCWU000321_00868
Uncharacterized protein (154 aa)
 
          0.973
GCWU000321_00866
Uncharacterized protein (534 aa)
 
          0.965
GCWU000321_00863
Bacterial type II and III secretion system protein (449 aa)
 
          0.854
GCWU000321_00649
Uncharacterized protein (397 aa)
 
          0.780
GCWU000321_00399
SpoIVB peptidase S55 (648 aa)
 
          0.779
GCWU000321_00394
Uncharacterized protein (1461 aa)
 
          0.778
GCWU000321_00389
Outer membrane protein (179 aa)
 
          0.778
GCWU000321_01095
Outer membrane protein (138 aa)
   
          0.778
GCWU000321_01808
Outer membrane protein (134 aa)
   
          0.777
GCWU000321_00648
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (144 aa)
 
          0.773
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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