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GCWU000321_00896 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00896" - Efflux ABC transporter, permease protein in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00896Efflux ABC transporter, permease protein (378 aa)    
Predicted Functional Partners:
GCWU000321_00895
ABC transporter, ATP-binding protein (229 aa)
 
  0.996
GCWU000321_00894
FMN-binding domain protein (171 aa)
 
          0.972
GCWU000321_00898
Uncharacterized protein (420 aa)
 
        0.968
GCWU000321_01483
ABC transporter, ATP-binding protein (231 aa)
 
  0.943
GCWU000321_00899
Uncharacterized protein (228 aa)
 
        0.930
GCWU000321_00900
Gram-positive signal peptide protein, YSIRK family (400 aa)
 
        0.929
GCWU000321_00897
Efflux ABC transporter, permease protein (422 aa)
 
       
0.914
GCWU000321_00130
ABC transporter, ATP-binding protein (238 aa)
   
  0.908
GCWU000321_01005
Efflux transporter, RND family, MFP subunit (354 aa)
   
 
  0.881
GCWU000321_00129
Efflux transporter, RND family, MFP subunit (362 aa)
   
 
  0.881
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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