STRINGSTRING
GCWU000321_00983 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00983" - Periplasmic binding protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00983Periplasmic binding protein (364 aa)    
Predicted Functional Partners:
GCWU000321_00985
ABC transporter, ATP-binding protein (264 aa)
 
 
  0.997
GCWU000321_00984
Iron chelate uptake ABC transporter, FeCT family, permease protein (353 aa)
 
 
  0.996
GCWU000321_01691
ABC transporter, ATP-binding protein (259 aa)
 
 
  0.964
GCWU000321_01690
Iron chelate uptake ABC transporter, FeCT family, permease protein (343 aa)
 
 
  0.937
GCWU000321_01746
ABC transporter, ATP-binding protein (265 aa)
   
 
  0.937
GCWU000321_01045
ABC transporter, ATP-binding protein (256 aa)
   
 
  0.937
GCWU000321_00109
ABC transporter, ATP-binding protein (261 aa)
   
 
  0.937
GCWU000321_01745
Iron chelate uptake ABC transporter, FeCT family, permease protein (351 aa)
   
 
  0.903
GCWU000321_00108
Iron chelate uptake ABC transporter, FeCT family, permease protein (305 aa)
   
 
  0.903
GCWU000321_01044
Iron chelate uptake ABC transporter, FeCT family, permease protein (338 aa)
   
 
  0.887
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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