STRINGSTRING
GCWU000321_01056 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01056" - Uncharacterized protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01056Uncharacterized protein (43 aa)    
Predicted Functional Partners:
GCWU000321_01055
TonB-dependent siderophore receptor (719 aa)
              0.859
GCWU000321_01057
Uncharacterized protein (41 aa)
              0.627
GCWU000321_01054
ABC transporter, substrate-binding protein, family 5 (511 aa)
              0.578
GCWU000321_01053
ABC transporter, permease protein (316 aa)
              0.578
GCWU000321_01052
ABC transporter, permease protein (279 aa)
              0.578
GCWU000321_01051
ABC transporter, ATP-binding protein (312 aa)
              0.578
GCWU000321_01050
ABC transporter, ATP-binding protein (254 aa)
              0.578
GCWU000321_01049
TonB-dependent siderophore receptor (739 aa)
              0.500
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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