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GCWU000321_01176 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01176" - ABC transporter, ATP-binding protein in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01176ABC transporter, ATP-binding protein (424 aa)    
Predicted Functional Partners:
GCWU000321_01175
ABC transporter, ATP-binding protein (139 aa)
          0.993
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (356 aa)
     
      0.607
trxA
Thioredoxin (110 aa)
   
        0.539
GCWU000321_00661
Putative lipid A export permease/ATP-binding protein MsbA (585 aa)
0.477
pheT
Phenylalanyl-tRNA synthetase beta subunit (823 aa)
     
        0.470
GCWU000321_00253
ABC transporter, ATP-binding protein (583 aa)
 
0.453
GCWU000321_00307
Histidine triad domain protein (119 aa)
   
        0.432
GCWU000321_01029
Carboxyl transferase domain protein (509 aa)
     
        0.431
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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