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GCWU000321_01303 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01303" - ABC transporter, solute-binding protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01303ABC transporter, solute-binding protein (352 aa)    
Predicted Functional Partners:
GCWU000321_01301
ABC transporter, permease protein (550 aa)
 
 
  0.992
GCWU000321_01302
ABC transporter, ATP-binding protein (379 aa)
 
 
  0.990
GCWU000321_01844
ABC transporter, permease protein (587 aa)
 
 
  0.973
GCWU000321_01153
ABC transporter, permease protein (553 aa)
 
 
  0.973
GCWU000321_01845
ABC transporter, ATP-binding protein (362 aa)
   
 
  0.904
GCWU000321_01238
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (331 aa)
   
 
  0.904
GCWU000321_01152
ABC transporter, ATP-binding protein (352 aa)
   
 
  0.904
GCWU000321_01240
ABC transporter, permease protein (272 aa)
   
 
  0.803
rplR
50S ribosomal protein L18 ; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (121 aa)
     
      0.593
rplO
50S ribosomal protein L15 ; Binds to the 23S rRNA (146 aa)
     
      0.593
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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