STRINGSTRING
GCWU000321_01365 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01365" - Virulence-associated protein E in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01365Virulence-associated protein E (794 aa)    
Predicted Functional Partners:
GCWU000321_01364
Putative DNA-directed DNA polymerase (656 aa)
 
          0.952
GCWU000321_01363
Uncharacterized protein (194 aa)
 
          0.935
GCWU000321_01362
Uncharacterized protein (389 aa)
 
          0.935
GCWU000321_01366
VRR-NUC domain protein (105 aa)
 
          0.866
GCWU000321_01367
SNF2 family N-terminal domain protein (459 aa)
 
          0.862
GCWU000321_01359
Helicase C-terminal domain protein (482 aa)
 
          0.679
GCWU000321_01361
Uncharacterized protein (137 aa)
              0.554
GCWU000321_01360
Methyltransferase (324 aa)
              0.543
GCWU000321_01368
Uncharacterized protein (142 aa)
 
          0.515
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (597 aa)
              0.407
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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