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GCWU000321_01423 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01423" - ABC transporter, permease protein in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01423ABC transporter, permease protein (232 aa)    
Predicted Functional Partners:
GCWU000321_01424
ABC transporter, ATP-binding protein (343 aa)
  0.995
GCWU000321_00166
ABC transporter, ATP-binding protein (245 aa)
  0.983
GCWU000321_00710
ABC transporter, ATP-binding protein (253 aa)
  0.983
GCWU000321_02011
ABC transporter, ATP-binding protein (252 aa)
  0.982
GCWU000321_00810
ABC transporter, ATP-binding protein (250 aa)
 
  0.981
GCWU000321_00805
ABC transporter, substrate-binding protein, family 3 (295 aa)
 
  0.965
GCWU000321_00475
ABC transporter, substrate-binding protein, family 3 (265 aa)
  0.954
GCWU000321_01987
ABC transporter, substrate-binding protein, family 3 (271 aa)
  0.950
GCWU000321_02009
ABC transporter, substrate-binding protein, family 3 (269 aa)
  0.931
GCWU000321_00707
ABC transporter, substrate-binding protein, family 3 (305 aa)
  0.912
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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