STRINGSTRING
trkA protein (Dialister invisus) - STRING interaction network
"trkA" - Potassium transporter peripheral membrane component in Dialister invisus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkAPotassium transporter peripheral membrane component (450 aa)    
Predicted Functional Partners:
GCWU000321_01532
Potassium uptake protein, TrkH family (482 aa)
 
 
  0.997
GCWU000321_00619
Cation transport protein (428 aa)
   
 
  0.914
GCWU000321_01534
Uncharacterized protein (59 aa)
              0.661
GCWU000321_01535
Uncharacterized protein (75 aa)
              0.651
ispF
Bifunctional enzyme IspD/IspF ; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (392 aa)
   
        0.592
sun
Ribosomal RNA small subunit methyltransferase B (454 aa)
   
        0.569
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (315 aa)
   
   
  0.487
GCWU000321_00848
Inosine 5-monophosphate dehydrogenase (502 aa)
         
  0.472
guaB
Inosine-5’-monophosphate dehydrogenase (489 aa)
         
  0.472
GCWU000321_01779
Transporter, DASS family (433 aa)
         
  0.456
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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