STRINGSTRING
thiW protein (Dialister invisus) - STRING interaction network
"thiW" - Protein ThiW in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiWProtein ThiW (170 aa)    
Predicted Functional Partners:
GCWU000321_01561
Uncharacterized protein (44 aa)
              0.819
thiM
4-methyl-5-beta-hydroxyethylthiazole kinase ; Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) (270 aa)
 
     
  0.665
GCWU000321_01560
Outer membrane protein alpha (617 aa)
              0.631
GCWU000321_01563
Pyridoxamine 5’-phosphate oxidase family protein (157 aa)
              0.627
thiE
Thiamine-phosphate pyrophosphorylase ; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (217 aa)
 
     
  0.553
secE
Preprotein translocase, SecE subunit (79 aa)
   
          0.433
thiD
Phosphomethylpyrimidine kinase (266 aa)
              0.424
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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