STRINGSTRING
GCWU000321_01569 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01569" - O-methyltransferase in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01569O-methyltransferase (203 aa)    
Predicted Functional Partners:
GCWU000321_01570
Peptidase, U32 family (406 aa)
 
          0.884
GCWU000321_01567
YceG family protein (341 aa)
              0.883
GCWU000321_00886
RNA methyltransferase, RsmD family (190 aa)
   
 
    0.785
GCWU000321_01571
Uncharacterized protein (77 aa)
              0.784
GCWU000321_01434
AMP-binding enzyme (479 aa)
   
  0.735
GCWU000321_00085
RNA methyltransferase, TrmH family (269 aa)
 
   
    0.703
GCWU000321_01134
Aldehyde dehydrogenase (NAD) family protein (502 aa)
   
 
    0.669
GCWU000321_01843
GroES-like protein (353 aa)
   
 
    0.666
GCWU000321_01568
Uncharacterized protein (55 aa)
              0.665
GCWU000321_00761
RNA methyltransferase, TrmH family, group 3 (282 aa)
       
    0.659
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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