STRINGSTRING
GCWU000321_01851 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01851" - Transcriptional regulator, MarR family in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01851Transcriptional regulator, MarR family (160 aa)    
Predicted Functional Partners:
GCWU000321_01850
ABC transporter, ATP-binding protein (244 aa)
 
          0.842
GCWU000321_01849
ABC transporter, substrate-binding protein, QAT family (503 aa)
 
          0.837
GCWU000321_01852
Uncharacterized protein (72 aa)
              0.664
GCWU000321_01848
GroES-like protein (320 aa)
 
          0.623
GCWU000321_01961
Uncharacterized protein (394 aa)
   
          0.423
GCWU000321_01651
MATE efflux family protein (420 aa)
 
          0.418
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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