STRINGSTRING
GCWU000321_01969 protein (Dialister invisus) - STRING interaction network
"GCWU000321_01969" - Putative ATP-dependent nuclease subunit B in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_01969Putative ATP-dependent nuclease subunit B (1028 aa)    
Predicted Functional Partners:
addA
ATP-dependent helicase/nuclease subunit A ; ATP-dependent DNA helicase (1285 aa)
 
 
  0.998
GCWU000321_01968
Uncharacterized protein (164 aa)
              0.665
recD2
ATP-dependent RecD-like DNA helicase ; DNA-dependent ATPase and ATP-dependent 5’-3’ DNA helicase. Has no activity on blunt DNA or DNA with 3’-overhangs, requires at least 10 bases of 5’-ssDNA for helicase activity (709 aa)
           
  0.644
GCWU000321_00051
Uncharacterized protein (243 aa)
 
          0.605
sbcD
Nuclease SbcCD subunit D ; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (389 aa)
 
     
  0.602
GCWU000321_00424
Ribosomal protein L7Ae (102 aa)
   
          0.596
GCWU000321_00449
Ser/Thr phosphatase family protein (421 aa)
 
     
  0.594
GCWU000321_00452
Uncharacterized protein (88 aa)
   
          0.565
ahpC
Peroxiredoxin (187 aa)
         
  0.530
sbcC
Nuclease SbcCD subunit C ; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (880 aa)
 
          0.512
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
Server load: low (10%) [HD]