STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA53553.1Bile acid:Na+ symporter, BASS family. (319 aa)    
Predicted Functional Partners:
SEA53505.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
     
 0.445
SEA53529.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.445
SDZ73158.1
Thioredoxin 1.
   
  0.442
SDZ86107.1
Thiol-disulfide isomerase or thioredoxin.
   
  0.442
SEA52610.1
Di-haem cytochrome c peroxidase.
   
  0.442
SEA65296.1
Peroxiredoxin.
   
  0.442
SEA72900.1
Small redox-active disulfide protein 2.
   
  0.442
SEA53483.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
       0.435
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.