STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU69058.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cro:ROD_32871 ABC transporter, substrate-binding protein. (318 aa)    
Predicted Functional Partners:
ADU69060.1
PFAM: inner-membrane translocator; KEGG: ctu:Ctu_36290 inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 0.993
ADU69061.1
PFAM: inner-membrane translocator; KEGG: efe:EFER_4309 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 0.993
ADU69059.1
KEGG: esa:ESA_00235 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.991
ADU70396.1
KEGG: eta:ETA_27250 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein.
  
 
 0.781
ADU67782.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: eta:ETA_03090 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein.
  
 
 0.769
ADU68458.1
KEGG: spe:Spro_1285 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver.
   
 
 0.723
rcsC
Integral membrane sensor hybrid histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
  
 
 0.667
ADU69067.1
PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.625
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.610
ADU67377.1
PFAM: inner-membrane translocator; KEGG: kpu:KP1_5280 D-xylose transport system permease component.
   
 0.608
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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