STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70743.1PFAM: ImpA domain protein; KEGG: ses:SARI_02709 hypothetical protein. (347 aa)    
Predicted Functional Partners:
ADU70746.1
KEGG: spe:Spro_1801 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305.
  
  
 0.838
ADU69635.1
KEGG: eta:ETA_18650 hypothetical protein; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400.
  
  
 0.761
ADU70744.1
KEGG: spe:Spro_1803 gpW/GP25 family protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein.
  
  
 0.759
ADU70745.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: kpu:KP1_2421 hypothetical protein.
  
  
 0.726
ADU70747.1
KEGG: spe:Spro_1800 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879.
  
  
 0.725
ADU70748.1
KEGG: spe:Spro_1799 ImpA domain-containing protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein.
     
 0.639
ADU70749.1
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: spe:Spro_1798 ImcF domain-containing protein.
  
  
 0.588
ADU69805.1
KEGG: pwa:Pecwa_2450 type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305.
  
  
 0.550
ADU70755.1
KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877.
  
  
 0.530
ADU70750.1
TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: esa:ESA_pESA3p05497 hypothetical protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
  
  
 0.519
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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