STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70748.1KEGG: spe:Spro_1799 ImpA domain-containing protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein. (525 aa)    
Predicted Functional Partners:
ADU70746.1
KEGG: spe:Spro_1801 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305.
 
  
 0.966
ADU70744.1
KEGG: spe:Spro_1803 gpW/GP25 family protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein.
 
  
 0.955
ADU70749.1
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: spe:Spro_1798 ImcF domain-containing protein.
 
  
 0.941
ADU70745.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: kpu:KP1_2421 hypothetical protein.
 
  
 0.938
ADU70747.1
KEGG: spe:Spro_1800 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879.
 
  
 0.937
ADU70753.1
KEGG: kpu:KP1_2396 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU.
 
  
 0.893
ADU70751.1
KEGG: pay:PAU_03833 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796.
 
  
 0.892
ADU70754.1
KEGG: spe:Spro_1785 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876.
 
  
 0.869
ADU70756.1
KEGG: esa:ESA_02043 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein.
 
  
 0.864
ADU70755.1
KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877.
 
  
 0.820
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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