STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70754.1KEGG: spe:Spro_1785 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876. (446 aa)    
Predicted Functional Partners:
ADU70751.1
KEGG: pay:PAU_03833 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796.
 
  
 0.962
ADU70756.1
KEGG: esa:ESA_02043 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein.
 
  
 0.962
ADU70755.1
KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877.
 
  
 0.957
ADU70753.1
KEGG: kpu:KP1_2396 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU.
 
  
 0.956
ADU69633.1
KEGG: eta:ETA_18630 OmpA family protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; OmpA/MotB domain protein.
 
  
 0.933
ADU70747.1
KEGG: spe:Spro_1800 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879.
 
 
 0.922
ADU70752.1
PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_1787 OmpA/MotB domain-containing protein.
 
     0.903
ADU69819.1
KEGG: pwa:Pecwa_2461 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein.
 
  
 0.896
ADU70745.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: kpu:KP1_2421 hypothetical protein.
 
  
 0.891
ADU70749.1
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: spe:Spro_1798 ImcF domain-containing protein.
 
  
 0.881
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.