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fau protein (Thermococcus gammatolerans) - STRING interaction network
"fau" - RNA-binding protein AU-1 in Thermococcus gammatolerans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
fauRNA-binding protein AU-1; Binds to RNA in loop regions with AU-rich sequences (471 aa)    
Predicted Functional Partners:
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (314 aa)
   
   
  0.907
TGAM_2069
annotation not available (251 aa)
              0.852
nadC-1
annotation not available (390 aa)
 
     
  0.694
TGAM_1798
Uncharacterized protein; 7 probable transmembrane helices predicted by modhmm (236 aa)
              0.629
moaA
Probable GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family (308 aa)
         
  0.615
TGAM_2067
annotation not available (336 aa)
 
          0.603
hisF
Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (252 aa)
         
  0.595
endA
tRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (168 aa)
           
  0.595
TGAM_0090
annotation not available (83 aa)
              0.593
hisA
annotation not available (226 aa)
         
  0.558
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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