STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fauRNA-binding protein FAU-1, ribonuclease E-like protein (FAU); Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. (471 aa)    
Predicted Functional Partners:
TGAM_2069
Conserved hypothetical protein.
       0.800
moaA
Molybdenum cofactor biosynthesis protein A (moaA); Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
     
 0.652
eno-2
Enolase-related protein (eno).
 
 
 
 0.573
TGAM_2067
Met-10 like-protein, putative SAM-dependent methyltransferase.
       0.543
eno-1
Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (eno); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.496
TGAM_2123
Conserved hypothetical protein; Contains probably 1 tRNA-binding domain (SSF46589) in Nterm and 1 t-snare domain (SSF47661) in Cterm.
  
     0.482
phoU-2
Phosphate uptake regulator, phoU and SpoVT/AbrB family (phoU).
 
    0.478
trmB-3
Transcription regulator, TrmB-like protein (TrmB).
  
     0.463
TGAM_2065
Nucleotidyltransferase, putative; Belongs to DUF86 family.
       0.461
TGAM_2066
Nucleotidyltransferase, putative, poly(A) polymerase (PAP) related.
       0.461
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.