STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.999
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.997
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.992
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.990
RBX1
RING-type domain-containing protein.
    
 0.985
UVSSA
Uncharacterized protein.
    
 
 0.983
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.981
G1Q2B7_MYOLU
RING-type domain-containing protein.
    
 0.977
G1Q2P5_MYOLU
RING-type domain-containing protein.
    
 0.977
G1QAP9_MYOLU
RING-type domain-containing protein.
    
 0.977
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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