STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1324PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_2443 major facilitator transporter. (475 aa)    
Predicted Functional Partners:
Tola_3099
PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV_1078 multidrug resistence transmembrane protein.
  
     0.752
Tola_1032
PFAM: secretion protein HlyD family protein; KEGG: vch:VC1410 multidrug resistance protein VceA.
 
 
 0.643
Tola_2805
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dde:Dde_0668 Bcr/CflA subfamily drug resistance transporter.
  
   
 0.635
Tola_1746
PFAM: secretion protein HlyD family protein; KEGG: pae:PA5159 multidrug resistance protein.
 
 
 0.629
Tola_1323
KEGG: gur:Gura_4371 hypothetical protein.
       0.625
Tola_2169
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1573 transporter.
  
   
 0.533
Tola_1325
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: efe:EFER_2674 putative transcriptional regulator, LysR family.
  
    0.445
Tola_1993
PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2654 major facilitator superfamily MFS_1.
  
   
 0.400
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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