STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1974PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4279 D-allose ABC transporter periplasmic-binding protein. (310 aa)    
Predicted Functional Partners:
Tola_1972
PFAM: inner-membrane translocator; KEGG: ecc:c5092 D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.987
Tola_1973
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_03786 D-allose transporter ATP-binding protein.
 
 0.973
Tola_0617
Multi-sensor hybrid histidine kinase; KEGG: aha:AHA_0905 aerobic respiration control sensor protein ArcB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; PAS domain containing protein.
  
 
 0.913
Tola_1388
Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: mno:Mnod_4585 multi-sensor hybrid histidine kinase.
  
 
 0.910
Tola_2747
Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; histidine kinase HAMP region domain protein; KEGG: aha:AHA_0816 hybrid sensory histidine kinase BarA.
  
 
 0.910
Tola_1628
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pin:Ping_2985 fused histidine kinase sensor/response regulator.
  
 
 0.883
Tola_0573
PFAM: inner-membrane translocator; KEGG: vpa:VPA1085 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
Tola_1834
PFAM: inner-membrane translocator; KEGG: eca:ECA1949 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.874
Tola_1941
PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.874
Tola_2156
PFAM: inner-membrane translocator; KEGG: aha:AHA_1905 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.872
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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