STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000550NEDD8-activating enzyme E1 regulatory subunit. (538 aa)    
Predicted Functional Partners:
CAOG_005043
Ubiquitin-activating enzyme.
   
0.999
CAOG_006522
Ubiquitin-like domain-containing protein.
    
 0.982
CAOG_007250
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.950
CAOG_003735
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.892
CAOG_007700
Autophagy-related protein.
   
 0.826
CAOG_003919
Ubiquitin-like protein ATG12.
    
 0.817
CAOG_001304
Autophagy-related protein 3.
    
 0.817
CAOG_000067
Ubiquitin.
   
 0.816
CAOG_001239
Thyroid hormone receptor interactor 12.
    
 0.813
CAOG_003638
Ubiquitin conjugating enzyme protein 26.
 
  
 0.784
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.