STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000613Sigma 1-type opioid receptor. (257 aa)    
Predicted Functional Partners:
CAOG_000853
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.912
CAOG_007273
Sterol C-14 reductase.
   
 
 0.900
CAOG_005595
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 
 0.888
CAOG_007297
Squalene monooxygenase, variant 1.
   
 
 0.887
CAOG_007134
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
   
 0.874
CAOG_005332
Sterol desaturase; Belongs to the sterol desaturase family.
   
 0.874
CAOG_005252
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.872
CAOG_007657
Methyltransf_25 domain-containing protein.
   
 0.872
CAOG_004722
Sterol desaturase; Belongs to the sterol desaturase family.
   
 0.867
CAOG_004184
Uncharacterized protein.
   
 
 0.863
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.