STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002955ATP-binding cassette sub-family B member 11. (1299 aa)    
Predicted Functional Partners:
CAOG_003871
ATP-binding cassette sub-family B member 7.
    
0.560
CAOG_004665
UCH domain-containing protein.
    
  0.553
CAOG_003781
USP domain-containing protein.
    
  0.553
CAOG_000547
Abc transporter.
    
0.547
CAOG_006601
Uncharacterized protein.
    
 0.544
CAOG_007535
Calreticulin.
    
 0.536
CAOG_004369
ENTH domain-containing protein.
    
 0.532
CAOG_001618
Adaptor protein complex AP-2; Belongs to the adaptor complexes medium subunit family.
    
  0.531
CAOG_008633
Uncharacterized protein.
    
 0.527
CAOG_002800
PDZ domain-containing protein.
    
 0.527
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.