STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_006184B3GNTL1 protein. (433 aa)    
Predicted Functional Partners:
CAOG_003425
UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase.
    
 0.570
CAOG_005924
Hexosyltransferase.
    
 0.570
CAOG_002329
GTP-binding protein yptV3.
     
 0.540
CAOG_003506
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
     
 0.534
CAOG_002097
Dynein heavy chain.
     
 0.526
CAOG_008445
WD_REPEATS_REGION domain-containing protein.
     
 0.524
CAOG_003033
Beta-centracetin.
     
 0.476
CAOG_003092
Uncharacterized protein; Belongs to the actin family.
     
 0.476
CAOG_008595
Uncharacterized protein; Belongs to the actin family.
     
 0.476
CAOG_000692
Actin.
     
 0.476
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.