STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_08245Unannotated protein. (249 aa)    
Predicted Functional Partners:
CQW49_08250
Unannotated protein.
  
 0.978
CQW49_08255
Unannotated protein; Belongs to the UbiA prenyltransferase family.
 
  
 0.953
CQW49_08235
Unannotated protein.
 
     0.901
CQW49_08240
Unannotated protein.
 
 
 
 0.883
CQW49_08230
Unannotated protein.
 
     0.675
CQW49_08225
Unannotated protein.
       0.605
CQW49_21405
Unannotated protein.
  
 
 0.470
CQW49_04145
Unannotated protein.
  
 
   0.427
CQW49_21485
Unannotated protein.
  
 
 0.411
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.