STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU34746.1PFAM: sodium/hydrogen exchanger; KEGG: vap:Vapar_0491 sodium/hydrogen exchanger. (423 aa)    
Predicted Functional Partners:
ADU34745.1
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.959
ADU34747.1
PFAM: site-specific recombinase Gcr; KEGG: vap:Vapar_0492 putative site-specific recombinase transmembrane protein.
 
     0.830
ADU36748.1
KEGG: vap:Vapar_2365 putative transmembrane protein.
 
     0.717
ADU36702.1
KEGG: vap:Vapar_2324 exonuclease-like protein.
 
     0.714
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.694
ADU35830.1
KEGG: vap:Vapar_1464 hypothetical protein.
 
    0.693
ADU39670.1
KEGG: aav:Aave_0365 putative ATP synthase protein I; manually curated; PFAM: ATP synthase I chain.
  
     0.691
ADU39598.1
KEGG: vap:Vapar_4784 hypothetical protein.
  
     0.689
ADU35837.1
KEGG: vap:Vapar_1471 hypothetical protein.
 
     0.678
ADU38917.1
KEGG: vap:Vapar_4089 putative lipoprotein.
  
     0.670
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.