STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU35019.1PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: vei:Veis_1531 SMP-30/gluconolaconase/LRE domain-containing protein. (313 aa)    
Predicted Functional Partners:
ADU39887.1
TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: vap:Vapar_5020 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein.
  
  
 0.921
ADU36157.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vap:Vapar_1774 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
  
 
 0.907
ADU36407.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vap:Vapar_3413 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
  
 
 0.907
ADU39058.1
KEGG: vap:Vapar_6143 gluconate kinase; TIGRFAM: gluconate kinase; PFAM: Carbohydrate kinase, FGGY-like; Belongs to the FGGY kinase family.
  
 
 0.906
ADU35018.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: vap:Vapar_0782 hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.781
ADU35021.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1534 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.732
ADU35020.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1533 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.709
ADU35023.1
KEGG: vei:Veis_1536 putative simple sugar transport system substrate-binding protein.
 
     0.678
ADU34441.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: vap:Vapar_0191 fumarylacetoacetate (FAA) hydrolase.
 
   
 0.632
ADU35024.1
KEGG: vap:Vapar_0783 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein.
 
   
 0.625
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.