node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADU34225.1 | ADU37184.1 | Varpa_0002 | Varpa_2997 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | 0.810 |
ADU34225.1 | ADU39275.1 | Varpa_0002 | Varpa_5115 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B. | 0.975 |
ADU34225.1 | polA | Varpa_0002 | Varpa_1682 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.989 |
ADU35632.1 | ADU37184.1 | Varpa_1416 | Varpa_2997 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | 0.566 |
ADU35632.1 | ADU39275.1 | Varpa_1416 | Varpa_5115 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B. | 0.440 |
ADU35632.1 | ku | Varpa_1416 | Varpa_0531 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.598 |
ADU35632.1 | ku-2 | Varpa_1416 | Varpa_2795 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.597 |
ADU35632.1 | ku-3 | Varpa_1416 | Varpa_2798 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.546 |
ADU35632.1 | polA | Varpa_1416 | Varpa_1682 | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.453 |
ADU35682.1 | ADU37184.1 | Varpa_1467 | Varpa_2997 | PFAM: Protein of unknown function DUF2277; KEGG: vap:Vapar_1346 hypothetical protein. | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | 0.714 |
ADU37182.1 | ADU37183.1 | Varpa_2995 | Varpa_2996 | KEGG: bta:616198 hypothetical LOC616198. | KEGG: vap:Vapar_2840 hypothetical protein. | 0.773 |
ADU37182.1 | ADU37184.1 | Varpa_2995 | Varpa_2997 | KEGG: bta:616198 hypothetical LOC616198. | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | 0.752 |
ADU37183.1 | ADU37182.1 | Varpa_2996 | Varpa_2995 | KEGG: vap:Vapar_2840 hypothetical protein. | KEGG: bta:616198 hypothetical LOC616198. | 0.773 |
ADU37183.1 | ADU37184.1 | Varpa_2996 | Varpa_2997 | KEGG: vap:Vapar_2840 hypothetical protein. | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | 0.752 |
ADU37184.1 | ADU34225.1 | Varpa_2997 | Varpa_0002 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.810 |
ADU37184.1 | ADU35632.1 | Varpa_2997 | Varpa_1416 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I. | 0.566 |
ADU37184.1 | ADU35682.1 | Varpa_2997 | Varpa_1467 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | PFAM: Protein of unknown function DUF2277; KEGG: vap:Vapar_1346 hypothetical protein. | 0.714 |
ADU37184.1 | ADU37182.1 | Varpa_2997 | Varpa_2995 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | KEGG: bta:616198 hypothetical LOC616198. | 0.752 |
ADU37184.1 | ADU37183.1 | Varpa_2997 | Varpa_2996 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | KEGG: vap:Vapar_2840 hypothetical protein. | 0.752 |
ADU37184.1 | ADU39275.1 | Varpa_2997 | Varpa_5115 | PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase. | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B. | 0.564 |