STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39225.1PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vap:Vapar_4402 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)    
Predicted Functional Partners:
ADU36454.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_3372 acyl-CoA dehydrogenase domain protein.
  
 0.939
ADU39226.1
PFAM: AMP-dependent synthetase and ligase; KEGG: vap:Vapar_4403 feruloyl-CoA synthase.
 
 
 0.938
ADU39224.1
PFAM: amidohydrolase 2; KEGG: vap:Vapar_4401 amidohydrolase 2.
 
    0.839
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.818
ADU34416.1
PFAM: homocysteine S-methyltransferase; KEGG: vap:Vapar_0167 homocysteine S-methyltransferase.
     
 0.808
ADU36036.1
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: vap:Vapar_1678 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
   
 
  0.802
ADU36126.1
PFAM: Methionine synthase vitamin-B12 independent; KEGG: vap:Vapar_1745 methionine synthase vitamin-B12 independent.
     
 0.802
metE
5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
     
 0.802
ADU36874.1
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: vap:Vapar_2972 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
   
 
  0.802
ADU37871.1
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: vap:Vapar_2203 cystathionine beta-lyase.
     
 0.802
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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