STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83992.1KEGG: dac:Daci_0490 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter. (361 aa)    
Predicted Functional Partners:
AEB83991.1
Protein tyrosine phosphatase; KEGG: bpt:Bpet1024 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
 
  
 0.885
AEB83989.1
Regulatory protein ArsR; SMART: HTH transcriptional regulator, ArsR; KEGG: bpt:Bpet1026 ArsR family transcriptional regulator.
 
  
 0.808
AEB83990.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0488 glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.777
AEB83993.1
TIGRFAM: Arsenate reductase; KEGG: rpf:Rpic12D_0647 arsenate reductase; PFAM: Arsenate reductase-like.
     
 0.766
AEB83995.1
KEGG: bav:BAV1573 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter.
     
 0.538
AEB83994.1
Transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; KEGG: oan:Oant_4665 PadR-like family transcriptional regulator.
       0.513
AEB83996.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: rme:Rmet_1246 GCN5-related N-acetyltransferase.
       0.512
AEB84265.1
Protein tyrosine phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
  
 0.489
AEB82557.1
KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit.
      
 0.419
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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