STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB87037.1ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1660 binding-protein-dependent transport systems inner membrane component. (302 aa)    
Predicted Functional Partners:
AEB87038.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1659 binding-protein-dependent transport systems inner membrane component.
 
 0.997
AEB87039.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: aav:Aave_1658 extracellular solute-binding protein.
 0.994
AEB87040.1
TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: aav:Aave_1657 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 0.992
AEB85879.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: rpf:Rpic12D_1762 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
  
 0.965
AEB83184.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0668 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: Oligopeptide/dipeptide ABC transporter, C-terminal; ABC transporter-like; Belongs to the ABC transporter superfamily.
  
 0.964
AEB83350.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
  
 0.964
AEB83185.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
  
 0.935
AEB83349.1
Nickel-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dia:Dtpsy_0817 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 0.935
AEB85880.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: axy:AXYL_03757 oligopeptide/dipeptide abc transporter, ATP-binding protein, C-terminal domain-containing protein 6; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; Belongs to the ABC transporter superfamily.
  
 0.919
AEB85380.1
Nickel-transporting ATPase, Polyamine-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dia:Dtpsy_1915 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 0.913
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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