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fgenesh2_kg.1__3525__AT1G34180.1 protein (Arabidopsis lyrata) - STRING interaction network
"fgenesh2_kg.1__3525__AT1G34180.1" - ANAC016 in Arabidopsis lyrata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgenesh2_kg.1__3525__AT1G34180.1ANAC016 (573 aa)    
Predicted Functional Partners:
fgenesh2_kg.3__3229__AT2G19450.1
O-acyltransferase (510 aa)
     
        0.841
ATUTR3
UDP-galactose transporter 3 (331 aa)
           
  0.542
fgenesh2_kg.5__180__AT2G02810.1
Uncharacterized protein (332 aa)
           
  0.542
ATBHLH029
Fe-deficiency induced transcription factor 1 (318 aa)
           
  0.529
Al_scaffold_0008_2143
Predicted protein (462 aa)
           
  0.529
fgenesh2_kg.7__3122__AT5G37260.1
Uncharacterized protein (289 aa)
           
  0.487
fgenesh2_kg.6__1729__AT5G17300.1
Myb family transcription factor (387 aa)
           
  0.487
EPR1
Early-phytochrome-responsive1 (354 aa)
           
  0.487
fgenesh2_kg.8__2527__AT5G64920.1
Uncharacterized protein (330 aa)
           
  0.467
fgenesh2_kg.1__2164__AT1G19850.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (903 aa)
           
  0.467
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 59689
Other names: A. lyrata, Arabidopsis lyrata, lyrate rockcress
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