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fgenesh2_kg.2__1466__AT1G72050.2 protein (Arabidopsis lyrata) - STRING interaction network
"fgenesh2_kg.2__1466__AT1G72050.2" - Uncharacterized protein in Arabidopsis lyrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgenesh2_kg.2__1466__AT1G72050.2Uncharacterized protein (392 aa)    
Predicted Functional Partners:
fgenesh2_kg.3__3166__AT2G20050.1
Uncharacterized protein (1093 aa)
     
 
  0.892
fgenesh2_kg.6__2997__AT4G10150.1
Zinc finger family protein (237 aa)
       
 
  0.747
scaffold_704070.1
Uncharacterized protein (302 aa)
           
  0.659
fgenesh2_kg.3__2755__AT3G25520.1
Uncharacterized protein (304 aa)
           
  0.659
Al_scaffold_0005_2898
Predicted protein (301 aa)
           
  0.659
fgenesh2_kg.1__3026__AT1G28520.2
Uncharacterized protein (486 aa)
           
  0.626
fgenesh2_kg.6__2244__AT5G22510.1
Uncharacterized protein (615 aa)
           
  0.597
fgenesh2_kg.5__72__AT2G01650.1
Uncharacterized protein (459 aa)
           
  0.594
fgenesh2_kg.4__740__AT2G28290.1
Uncharacterized protein (3451 aa)
       
 
  0.589
fgenesh2_kg.3__2524__AT3G23130.1
Uncharacterized protein (204 aa)
           
  0.586
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 59689
Other names: A. lyrata, Arabidopsis lyrata, lyrate rockcress
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