Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTB | ACTG1 | ENSTGUP00000023808 | ENSTGUP00000030258 | Uncharacterized protein. | Actin, cytoplasmic 2. | 0.901 |
ACTB | LOC100229883-2 | ENSTGUP00000023808 | ENSTGUP00000037065 | Uncharacterized protein. | Uncharacterized protein. | 0.901 |
ACTB | TMSB4X | ENSTGUP00000023808 | ENSTGUP00000008491 | Uncharacterized protein. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.918 |
ACTG1 | ACTB | ENSTGUP00000030258 | ENSTGUP00000023808 | Actin, cytoplasmic 2. | Uncharacterized protein. | 0.901 |
ACTG1 | LOC100229883-2 | ENSTGUP00000030258 | ENSTGUP00000037065 | Actin, cytoplasmic 2. | Uncharacterized protein. | 0.901 |
ACTG1 | TMSB4X | ENSTGUP00000030258 | ENSTGUP00000008491 | Actin, cytoplasmic 2. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.918 |
CLASP1 | TMSB4X | ENSTGUP00000025388 | ENSTGUP00000008491 | Uncharacterized protein. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.481 |
FKBP5 | STMN2 | ENSTGUP00000001731 | ENSTGUP00000035380 | Peptidylprolyl isomerase. | Stathmin; Belongs to the stathmin family. | 0.497 |
FKBP5 | STMN3 | ENSTGUP00000001731 | ENSTGUP00000030384 | Peptidylprolyl isomerase. | Stathmin; Belongs to the stathmin family. | 0.440 |
FKBP5 | STMN4 | ENSTGUP00000001731 | ENSTGUP00000026787 | Peptidylprolyl isomerase. | Stathmin; Belongs to the stathmin family. | 0.502 |
FKBP5 | TMSB4X | ENSTGUP00000001731 | ENSTGUP00000008491 | Peptidylprolyl isomerase. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.474 |
LOC100229883-2 | ACTB | ENSTGUP00000037065 | ENSTGUP00000023808 | Uncharacterized protein. | Uncharacterized protein. | 0.901 |
LOC100229883-2 | ACTG1 | ENSTGUP00000037065 | ENSTGUP00000030258 | Uncharacterized protein. | Actin, cytoplasmic 2. | 0.901 |
LOC100229883-2 | TMSB4X | ENSTGUP00000037065 | ENSTGUP00000008491 | Uncharacterized protein. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.918 |
SCG2 | SCG5 | ENSTGUP00000008135 | ENSTGUP00000012091 | Secretogranin II. | Secretogranin V. | 0.708 |
SCG2 | TMSB4X | ENSTGUP00000008135 | ENSTGUP00000008491 | Secretogranin II. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.410 |
SCG5 | SCG2 | ENSTGUP00000012091 | ENSTGUP00000008135 | Secretogranin V. | Secretogranin II. | 0.708 |
SCG5 | TMSB4X | ENSTGUP00000012091 | ENSTGUP00000008491 | Secretogranin V. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.501 |
STMN2 | FKBP5 | ENSTGUP00000035380 | ENSTGUP00000001731 | Stathmin; Belongs to the stathmin family. | Peptidylprolyl isomerase. | 0.497 |
STMN2 | TMSB4X | ENSTGUP00000035380 | ENSTGUP00000008491 | Stathmin; Belongs to the stathmin family. | Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. | 0.408 |
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