STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0ZGC0_TAEGUUncharacterized protein. (1230 aa)    
Predicted Functional Partners:
ABCG2
ATP binding cassette subfamily G member 2 (Junior blood group).
  
 0.761
LOC100227038
ABC transporter domain-containing protein.
  
 0.761
GOLPH3L
Uncharacterized protein.
    
 
 0.642
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.540
APOB
Apolipoprotein B.
   
 
 0.524
GOPC
PDZ domain-containing protein.
   
 0.520
C8A
Complement C8 alpha chain.
   
  
 0.507
GOLPH3
Golgi phosphoprotein 3.
    
 
 0.501
USP10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.484
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.482
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.