STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NALCNSodium leak channel, non-selective. (1762 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.996
UNC80
Uncharacterized protein.
   
 0.988
SCN3B
Ig-like domain-containing protein.
    
 0.813
H0ZKK8_TAEGU
Uncharacterized protein.
   
 
 0.805
FAM155B
Family with sequence similarity 155 member B.
   
 
 0.805
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.636
WDR35
WD repeat-containing protein 35.
    
 0.636
IFT122
Intraflagellar transport 122.
   
 0.624
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.616
WDR19
WD repeat domain 19.
    
 0.616
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.