STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZUP1Zinc finger containing ubiquitin peptidase 1. (602 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 
 0.927
ENSTGUP00000035639
annotation not available
    
 
 0.850
UBB
Ubiquitin B.
    
 
 0.775
ENSTGUP00000037953
annotation not available
    
 
 0.775
RPS27A
Ubiquitin-like domain-containing protein.
    
 
 0.750
MYSM1
Uncharacterized protein.
      
 0.677
LOC115490559
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.635
LOC100219036
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.635
ZFAND4
Zinc finger AN1-type containing 4.
    
 
 0.626
OASL
2'-5'-oligoadenylate synthetase like.
    
 
 0.614
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.