STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNK2Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1208 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 
 0.964
GRB2
Putative growth factor receptor-bound protein 2.
    
 
 0.808
SH3RF3
E3 ubiquitin-protein ligase SH3RF3.
    
 
 0.697
NCK2
NCK adaptor protein 2.
    
 
 0.672
GRAP
Uncharacterized protein.
    
 
 0.554
GRAP2
Uncharacterized protein.
    
 
 0.554
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.543
CLTCL1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.543
SNX18
Sorting nexin 18.
    
 
 0.524
SNX33
Sorting nexin.
    
 
 0.524
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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