STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLFHLF transcription factor, PAR bZIP family member. (292 aa)    
Predicted Functional Partners:
NFILZ
Long intergenic non-protein coding RNA 1862.
    
 
0.591
NFIL3
Nuclear factor, interleukin 3 regulated.
    
 
0.591
ATF4
Activating transcription factor 4.
   
 0.581
LOC100221209
Uncharacterized protein.
   
 0.560
LOC100218354
Taeniopygia guttata cytochrome c oxidase subunit 5A, mitochondrial-like (LOC100218354), mRNA.
   
 0.560
COX7C
Putative cytochrome c oxidase subunit VIIc.
   
 0.555
C1orf198
Chromosome 1 open reading frame 198.
   
 0.555
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.555
LOC100222254
Cytochrome c oxidase subunit 4I1.
   
 0.541
UQCRB
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.490
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.