STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WH47_07919Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
WH47_01059
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.739
WH47_10075
Lysine-specific demethylase 6A.
    
 0.613
WH47_10318
Ragulator complex protein LAMTOR2.
    
 0.593
WH47_12401
30S ribosomal protein S11, chloroplastic.
    
  0.587
WH47_04036
28S ribosomal protein S2, mitochondrial.
   
  0.584
WH47_06082
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
    
  0.583
WH47_12376
Putative 28S ribosomal protein S6, mitochondrial.
    
  0.583
WH47_00137
Putative 28S ribosomal protein S16, mitochondrial.
   
  0.583
WH47_06989
Uncharacterized protein.
    
  0.583
WH47_06835
28S ribosomal protein S28, mitochondrial.
    
  0.583
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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