ANAPC7 protein (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANAPC7

Anaphase promoting complex subunit 7. (565 aa)

Predicted Functional Partners:

ANAPC10

0.998

ANAPC5

0.998

ANAPC4

0.998

FZR1

0.997

BUB1B

0.996

CDC27

0.996

ANAPC2

0.996

CDC23

0.993

CDC16

0.993

ANAPC1

0.987

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC1	ANAPC10	ENSFALP00000011999	ENSFALP00000005764	Anaphase promoting complex subunit 1.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.998
ANAPC1	ANAPC2	ENSFALP00000011999	ENSFALP00000005835	Anaphase promoting complex subunit 1.	Anaphase promoting complex subunit 2; Belongs to the cullin family.	0.998
ANAPC1	ANAPC4	ENSFALP00000011999	ENSFALP00000009575	Anaphase promoting complex subunit 1.	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	0.998
ANAPC1	ANAPC5	ENSFALP00000011999	ENSFALP00000009560	Anaphase promoting complex subunit 1.	Anaphase promoting complex subunit 5.	0.998
ANAPC1	ANAPC7	ENSFALP00000011999	ENSFALP00000009615	Anaphase promoting complex subunit 1.	Anaphase promoting complex subunit 7.	0.987
ANAPC1	BUB1B	ENSFALP00000011999	ENSFALP00000001087	Anaphase promoting complex subunit 1.	Uncharacterized protein.	0.984
ANAPC1	CDC16	ENSFALP00000011999	ENSFALP00000003592	Anaphase promoting complex subunit 1.	Cell division cycle 16.	0.998
ANAPC1	CDC23	ENSFALP00000011999	ENSFALP00000003490	Anaphase promoting complex subunit 1.	Cell division cycle 23.	0.998
ANAPC1	CDC27	ENSFALP00000011999	ENSFALP00000004944	Anaphase promoting complex subunit 1.	Cell division cycle 27.	0.998
ANAPC1	FZR1	ENSFALP00000011999	ENSFALP00000012084	Anaphase promoting complex subunit 1.	Fizzy and cell division cycle 20 related 1.	0.992
ANAPC10	ANAPC1	ENSFALP00000005764	ENSFALP00000011999	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase promoting complex subunit 1.	0.998
ANAPC10	ANAPC2	ENSFALP00000005764	ENSFALP00000005835	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase promoting complex subunit 2; Belongs to the cullin family.	0.998
ANAPC10	ANAPC4	ENSFALP00000005764	ENSFALP00000009575	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	0.998
ANAPC10	ANAPC5	ENSFALP00000005764	ENSFALP00000009560	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase promoting complex subunit 5.	0.999
ANAPC10	ANAPC7	ENSFALP00000005764	ENSFALP00000009615	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Anaphase promoting complex subunit 7.	0.998
ANAPC10	BUB1B	ENSFALP00000005764	ENSFALP00000001087	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Uncharacterized protein.	0.997
ANAPC10	CDC16	ENSFALP00000005764	ENSFALP00000003592	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Cell division cycle 16.	0.998
ANAPC10	CDC23	ENSFALP00000005764	ENSFALP00000003490	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Cell division cycle 23.	0.998
ANAPC10	CDC27	ENSFALP00000005764	ENSFALP00000004944	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Cell division cycle 27.	0.998
ANAPC10	FZR1	ENSFALP00000005764	ENSFALP00000012084	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Fizzy and cell division cycle 20 related 1.	0.985