STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1199Conserved hypothetical protein; Alternative locus ID: PMED4_13641. (370 aa)    
Predicted Functional Partners:
manC
GDP-mannose pyrophosphorylase; Alternative locus ID: PMED4_13611; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.630
sps
Sucrose phosphate synthase; Alternative locus ID: PMED4_19231.
  
 
 0.607
PMM1177
Conserved hypothetical protein; Alternative locus ID: PMED4_13421.
 
  
 0.587
PMM1200
Glycosyl transferase, family 2; Alternative locus ID: PMED4_13651.
  
  
 0.534
PMM1198
Hypothetical protein; Alternative locus ID: PMED4_13631.
  
    0.525
PMM1496
Dolichyl-phosphate-mannose-protein mannosyltransferase; Alternative locus ID: PMED4_17061.
  
  
 0.520
PMM1201
Putative CDP-tyvelose-2-epimerase (RfbE); Alternative locus ID: PMED4_13661.
  
  
 0.515
galE
UDP-glucose-4-epimerase; Alternative locus ID: PMED4_13741; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.503
PMM0488
Conserved hypothetical protein; Alternative locus ID: PMED4_05371.
 
  
 0.473
ddhA,
Glucose-1-phosphate cytidylyltransferase; Alternative locus ID: PMED4_13691.
  
   0.452
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.