STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV02_0010Ribonucleotide reductase of class II (coenzyme B12-dependent); Alternative locus ID: PSB_1407. (777 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.906
EV02_0766
Hypothetical protein; Alternative locus ID: PSB_0234; FIG00940877: hypothetical protein.
 
     0.777
EV02_0664
Aldehyde decarbonylase; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.766
EV02_0548
Hypothetical protein; Alternative locus ID: PSB_0016; FIG00942612: hypothetical protein.
  
     0.754
EV02_0538
Putative phage integrase; Alternative locus ID: PSB_0006.
  
     0.746
EV02_0204
Hypothetical protein; Alternative locus ID: PSB_1601; Slr0957 homolog.
  
     0.745
EV02_1530
Hypothetical protein; Alternative locus ID: PSB_0999; FIG00940582: hypothetical protein.
  
     0.742
EV02_0672
Phage integrase family; Alternative locus ID: PSB_0140.
  
     0.740
EV02_1388
Cob(I)alamin adenosyltransferase; Alternative locus ID: PSB_0857.
  
     0.734
EV02_0663
Acetylornithine aminotransferase; Alternative locus ID: PSB_0131.
  
     0.730
Your Current Organism:
Prochlorococcus marinus SB
NCBI taxonomy Id: 59926
Other names: P. marinus str. SB, Prochlorococcus marinus str. RCC295, Prochlorococcus marinus str. SB, Prochlorococcus sp. RCC295, Prochlorococcus sp. SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.